Architecture Exploration of FPGA Based Accelerators for BioInformatics Applications

English | 3 Mar. 2016 | ISBN: 9811005893 | 133 Pages | PDF | 5.61 MB

This book presents an evaluation methodology to design future FPGA fabrics incorporating hard embedded blocks (HEBs) to accelerate applications. This methodology will be useful for selection of blocks to be embedded into the fabric and for evaluating the performance gain that can be achieved by such an embedding. The authors illustrate the use of their methodology by studying the impact of HEBs on two important bioinformatics applications: protein docking and genome assembly.

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